IHPE – REY Olivier

OlivierIHPE UMR 5244
Université de Perpignan via Domitia
52 Avenue Paul Alduy
F-66860 Perpignan Cedex
Tel +33(0)4-68-66-21-80 ou 20-50
Fax +33(0)4-68-66-22-81
email: olivier.rey@univ-perp.fr

GRADE : Maître de Conférences, Université de Perpignan Via Domitia
EQUIPE : MIA
ENCADREMENT DE THESE :
DOUCHET Philippe ; JAQUET Mathilde
RESPONSABILITES :
Responsable Axe One Health IHPE
Co-responsable Axe 1 Fédération de Recherche 2043 FREE

RESEAUX SOCIAUX SCIENTIFIQUES :
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DOMAINE D’EXPERTISE-RECHERCHE :
Mes travaux de recherche s’articulent autour de trois axes principaux :
(i) la compréhension de l’influence des facteurs historiques et contemporains sur l’histoire évolutive des populations naturelles;
(ii) l’étude des réponses adaptatives des organismes en milieu naturel face aux changements environnementaux et
(iii) l’identification des mécanismes moléculaires sous-jacents à ces processus adaptatifs. J’utilise des approches intégratives couplant l’étude des populations naturelles, des expériences en milieux contrôlés et des outils empruntés à la biologie moléculaire. Mes modèles de prédilections sont les espèces invasives et les pathogènes (ré)émergents.
J’ai rejoint le laboratoire IHPE (Interactions-Hôtes-Parasites-Environnements) en Septembre 2016. Je souhaite développer des projets visant à étudier la dynamique évolutive du genre Schistosoma d’Afrique, des vers trématodes responsable des bilharzioses.
D’autre part, je poursuis mes travaux sur la dynamique éco-évolutive d’un copépode ectoparasite invasif et sur la réponse des populations de poissons hôtes dans les rivières en France, en collaboration avec Simon Blanchet (CR1 – CNRS) et Géraldine Loot (Professeur – Université Paul Sabatier – Toulouse).

CURSUS :
2016-présent Maitre de Conférences (Université de Perpignan Via Domitia)
2016 Post-Doctorat (Université de Swansea, Pays de Galles)
2015 Post-Doctorat (Station d’Ecologie Théorique et Expérimentale du CNRS, Moulis)
2011 Doctorat (Centre de Biologie pour la Gestion des Populations, INRA – SupAgro, Montpellier)
2008 Assistant ingénieur (Université Paul Sabatier, Toulouse)
2007 Volontaire Civil à l’aide Technique (Base Dumont d’Urville, Antarctique)
2005 Maîtrise en biologie (Université Laval, Canada)
2003 Licence, échange universitaire (Université de Montréal, Canada)
2002 DEUG, Université Montpellier II

PUBLICATIONS :


57 documents

Articles dans une revue51 documents

  • M. Blin, Bruno Senghor, Jérôme Boissier, Stephen Mulero, Olivier REY, et al.. Development of environmental loop-mediated isothermal amplification (eLAMP) diagnostic tool for Bulinus truncatus field detection. Parasites & Vectors, 2023, 16 (1), pp.78. ⟨10.1186/s13071-023-05705-4⟩. ⟨hal-04012029⟩
  • Eglantine Mathieu-Bégné, Simon Blanchet, Olivier REY, Eve Toulza, Charlotte Veyssière, et al.. A longitudinal survey in the wild reveals major shifts in fish host microbiota after parasite infection. Molecular Ecology, 2023, 32 (5), ⟨10.1111/mec.16901⟩. ⟨hal-04013020⟩
  • A. Alba, S. Grech-Angelini, A.A. Vázquez, P. Alda, Q. Blin, et al.. Fasciolosis in the Mediterranean island of Corsica (France): Insights from epidemiological and malacological investigations. Food and Waterborne Parasitology, 2023, 30, pp.e00188. ⟨10.1016/j.fawpar.2023.e00188⟩. ⟨hal-03954498⟩
  • Philippe Douchet, Benjamin Gourbal, Eric Loker, Olivier Rey. Schistosoma transmission: scaling-up competence from hosts to ecosystems. Trends in Parasitology, In press, ⟨10.1016/j.pt.2023.04.001⟩. ⟨hal-04097261⟩
  • Bruno Senghor, Eglantine Mathieu-Bégné, Olivier REY, Souleymane Doucouré, Cheikh Sokhna, et al.. Urogenital schistosomiasis in three different water access in the Senegal river basin: prevalence and monitoring praziquantel efficacy and re-infection levels. BMC Infectious Diseases, 2022, 22, ⟨10.1186/s12879-022-07813-5⟩. ⟨hal-03924097⟩
  • A.M. Onyekwere, Olivier REY, M.C. Nwanchor, M. Alo, E.K. Angora, et al.. Prevalence and risk factors associated with urogenital schistosomiasis among primary school pupils in Nigeria. Parasite Epidemiology and Control, 2022, pp.e00255. ⟨10.1016/j.parepi.2022.e00255⟩. ⟨hal-03714441⟩
  • Jeremie Vidal-Dupiol, Erwan Harscouet, Dor Shefy, Eve Toulza, Olivier Rey, et al.. Frontloading of stress response genes enhances robustness to environmental change in chimeric corals. BMC Biology, 2022, 20, ⟨10.1186/s12915-022-01371-7⟩. ⟨hal-03738334⟩
  • Philippe Douchet, Jérôme Boissier, Stephen Mulero, Hubert Ferté, Margot Doberva, et al.. Make visible the invisible: Optimized development of an environmental DNA metabarcoding tool for the characterization of trematode parasitic communities. Environmental DNA, 2022, 4 (3), pp.627-641. ⟨10.1002/edn3.273⟩. ⟨hal-03609540⟩
  • Eglantine Mathieu-Bégné, Simon Blanchet, Guillaume Mitta, Clément Le Potier, Géraldine Loot, et al.. Transcriptomic Adjustments in a Freshwater Ectoparasite Reveal the Role of Molecular Plasticity for Parasite Host Shift. Genes, 2022, 13 (3), pp.525. ⟨10.3390/genes13030525⟩. ⟨hal-03612724⟩
  • K. Brener-Raffalli, Jeremie Vidal-Dupiol, M. Adjeroud, Olivier REY, P. Romans, et al.. Gene expression plasticity and frontloading promote thermotolerance in Pocillopora corals. Peer Community Journal, 2022, 2, pp.e13. ⟨10.24072/pcjournal.79⟩. ⟨hal-03239787⟩
  • Amos Onyekwere, Olivier Rey, Jean-François Allienne, Monday Chukwu Nwanchor, Moses Alo, et al.. Population Genetic Structure and Hybridization of Schistosoma haematobium in Nigeria. Pathogens, 2022, 11 (4), pp.425. ⟨10.3390/pathogens11040425⟩. ⟨hal-03629247⟩
  • Eglantine Mathieu-Bégné, Simon Blanchet, Olivier REY, Orlane Scelsi, Camille Poesy, et al.. A fine‐scale analysis reveals microgeographic hotspots maximizing infection rate between a parasite and its fish host. Functional Ecology, 2022, 36 (2), pp.380-391. ⟨10.1111/1365-2435.13967⟩. ⟨hal-03455005⟩
  • Julien Kincaid-Smith, Alan Tracey, Ronaldo de Carvalho Augusto, Ingo Bulla, Nancy Holroyd, et al.. Morphological and genomic characterisation of the Schistosoma hybrid infecting humans in Europe reveals admixture between Schistosoma haematobium and Schistosoma bovis. PLoS Neglected Tropical Diseases, 2021, 15 (12), pp.e0010062. ⟨10.1371/journal.pntd.0010062⟩. ⟨hal-03508340⟩
  • Jérôme G Prunier, Keoni Saint-Pé, Simon Blanchet, Géraldine Loot, Olivier REY. Molecular approaches reveal weak sibship aggregation and a high dispersal propensity in a non‐native fish parasite. Ecology and Evolution, 2021, ⟨10.1002/ece3.7415⟩. ⟨hal-03225423⟩
  • Olivier REY, B.L. Webster, T. Huyse, D. Rollinson, F. van den Broeck, et al.. Population genetics of African Schistosoma species. Infection, Genetics and Evolution, 2021, 89, pp.104727. ⟨10.1016/j.meegid.2021.104727⟩. ⟨hal-03128417⟩
  • Olivier REY, Eve Toulza, Jérôme Boissier, Cristian Chaparro, Jean-François Allienne, et al.. Diverging patterns of introgression from Schistosoma bovis across S. haematobium African lineages. PLoS Pathogens, 2021, 17 (2), pp.e1009313. ⟨10.1371/journal.ppat.1009313⟩. ⟨hal-03176500⟩
  • Laura Fargeot, Géraldine Loot, Jérôme Prunier, Olivier REY, Charlotte Veyssière, et al.. Patterns of Epigenetic Diversity in Two Sympatric Fish Species: Genetic vs. Environmental Determinants. Genes, 2021, 12 (1), pp.107. ⟨10.3390/genes12010107⟩. ⟨hal-03128511⟩
  • Ronaldo de Carvalho Augusto, Olivier REY, Céline Cosseau, Cristian Chaparro, Jeremie Vidal-Dupiol, et al.. A simple ATAC-seq protocol for population epigenetics. Wellcome Open Research, 2021, 5, pp.121. ⟨10.12688/wellcomeopenres.15552.2⟩. ⟨hal-03145575v2⟩
  • Stephen Mulero, Eve Toulza, Anaïs Loisier, Meryl Zimmerman, Jean-François Allienne, et al.. Malacological survey in a bottle of water: a comparative study between manual sampling and environmental DNA metabarcoding approaches. Global Ecology and Conservation, 2021, 25, pp.e01428. ⟨10.1016/j.gecco.2020.e01428⟩. ⟨hal-03106124⟩
  • Tadesse Kebede, Nicolas Bech, Jean-François Allienne, Berhanu Erko, Jérôme Boissier, et al.. Genetic evidence for the role of non-human primates as reservoir hosts for human schistosomiasis. PLoS Neglected Tropical Diseases, 2020, ⟨10.1371/journal.pntd.0008538⟩. ⟨hal-02975305⟩
  • Simon Blanchet, Jérôme Prunier, Ivan Paz-Vinas, Keoni Saint-Pé, Olivier REY, et al.. A river runs through it: The causes, consequences, and management of intraspecific diversity in river networks. Evolutionary Applications, 2020, 13 (6), pp.1195-1213. ⟨10.1111/eva.12941⟩. ⟨hal-02914974⟩
  • Etienne K Angora, Jean-François Allienne, Hervé Menan, Olivier REY, Andre O Touré, et al.. High prevalence of Schistosoma haematobium × Schistosoma bovis hybrids in schoolchildren in Côte d'Ivoire. Parasitology, 2020, 147 (3), pp.287-294. ⟨10.1017/S0031182019001549⟩. ⟨hal-03164759⟩
  • Félicité Flore Djuikwo-Teukeng, Alain Kouam Simo, Jean-François Allienne, Olivier REY, Arouna Njayou Ngapagna, et al.. Population genetic structure of Schistosoma bovis in Cameroon. Parasites & Vectors, 2019, 12 (1), pp.56. ⟨10.1186/s13071-019-3307-0⟩. ⟨hal-02015156⟩
  • Stephen Mulero, Jérôme Boissier, Jean-François Allienne, Yann Quilichini, Joséphine Foata, et al.. Environmental DNA for detecting Bulinus truncatus: a new environmental surveillance tool for schistosomiasis emergence risk assessment. Environmental DNA, 2019, ⟨10.1002/edn3.53⟩. ⟨hal-02417191⟩
  • Olivier REY, Christophe Eizaguirre, Bernard Angers, Miguel Baltazar-Soares, Kostas Sagonas, et al.. Linking epigenetics and biological conservation: Towards a conservation epigenetics perspective. Functional Ecology, 2019, 34 (2), pp.414-427. ⟨10.1111/1365-2435.13429⟩. ⟨hal-02350934⟩
  • Deiene Rodriguez-Barreto, Olivier REY, Tamsyn Uren-Webster, Giovanni Castaldo, Sonia Consuegra, et al.. Transcriptomic response to aquaculture intensification in Nile tilapia. Evolutionary Applications, 2019, 12 (9), pp.1757-1771. ⟨10.1111/eva.12830⟩. ⟨hal-04080755⟩
  • Ana Oleaga, Olivier REY, Bruno Polack, Sébastien Grech-Angelini, Yann Quilichini, et al.. Epidemiological surveillance of schistosomiasis outbreak in Corsica (France): Are animal reservoir hosts implicated in local transmission?. PLoS Neglected Tropical Diseases, 2019, 13 (6), pp.e0007543. ⟨10.1371/journal.pntd.0007543⟩. ⟨hal-02179171⟩
  • Etienne Danchin, Arnaud Pocheville, Olivier REY, Benoit Pujol, Simon Blanchet. Epigenetically facilitated mutational assimilation: epigenetics as a hub within the inclusive evolutionary synthesis. Biological Reviews, 2019, 94 (1), pp.259-282. ⟨10.1111/brv.12453⟩. ⟨hal-03007472⟩
  • Yohann Le Govic, Julien Kincaid-Smith, Jean-François Allienne, Olivier REY, Ludovic de Gentile, et al.. Schistosoma haematobium – Schistosoma mansoni Hybrid Parasite in Migrant Boy, France, 2017. Emerging Infectious Diseases, 2019, 25 (2), pp.365-367. ⟨10.3201/eid2502.172028⟩. ⟨hal-02483187⟩
  • Stephen Mulero, Olivier REY, Nathalie Arancibia, Santiago S. Mas-Coma, Jérôme Boissier. Persistent establishment of a tropical disease in Europe: the preadaptation of schistosomes to overwinter. Parasites & Vectors, 2019, 12, pp.379. ⟨10.1186/s13071-019-3635-0⟩. ⟨hal-02264109⟩
  • Eglantine Mathieu-Bégné, Géraldine Loot, Simon Blanchet, Eve Toulza, Clémence Genthon, et al.. De novo transcriptome assembly for Tracheliastes polycolpus, an invasive ectoparasite of freshwater fish in western Europe. Marine Genomics, 2019, 46, pp.58-61. ⟨10.1016/j.margen.2018.12.001⟩. ⟨hal-02169680⟩
  • Amy Ellison, Tamsyn Uren Webster, Olivier REY, Carlos Garcia de Leaniz, Sofia Consuegra, et al.. Transcriptomic response to parasite infection in Nile tilapia (Oreochromis niloticus) depends on rearing density. BMC Genomics, 2018, 19 (1), pp.723. ⟨10.1186/s12864-018-5098-7⟩. ⟨hal-04080731⟩
  • Lucila Chifflet, Noelia Verónica Guzmán, Olivier REY, Viviana Andrea Confalonieri, Luis Alberto Calcaterra. Southern expansion of the invasive ant Wasmannia auropunctata within its native range and its relation with clonality and human activity. PLoS ONE, 2018, 13 (11), pp.e0206602. ⟨10.1371/journal.pone.0206602⟩. ⟨hal-04080724⟩
  • Julien Kincaid-Smith, Olivier REY, Eve Toulza, Antoine Berry, Jérôme Boissier. Emerging Schistosomiasis in Europe: A need to quantify the risks. Trends in Parasitology, 2017, 33 (8), pp.600-609. ⟨10.1016/j.pt.2017.04.009⟩. ⟨hal-01598398⟩
  • Olivier REY, Etienne Danchin, Marie Mirouze, Celine Loot, Simon Blanchet. Adaptation to Global Change: A Transposable Element–Epigenetics Perspective. Trends in Ecology and Evolution, 2016, 31 (7), pp.514-526. ⟨10.1016/j.tree.2016.03.013⟩. ⟨hal-02099870⟩
  • Elise Mazé-Guilmo, Simon Blanchet, Olivier REY, Nicolas Canto, Géraldine Loot. Local adaptation drives thermal tolerance among parasite populations: a common garden experiment. Proceedings of the Royal Society B: Biological Sciences, 2016, 283 (1830), ⟨10.1098/rspb.2016.0587⟩. ⟨hal-02962563⟩
  • L. Chifflet, M. S. Rodriguero, L. A. Calcaterra, Olivier REY, V. A. Confalonieri, et al.. Evolutionary history of the little fire ant Wasmannia auropunctata before global invasion: inferring dispersal patterns, niche requirements and past and present distribution within its native range. Journal of Evolutionary Biology, 2016, 29 (4), pp.790-809. ⟨10.1111/jeb.12827⟩. ⟨hal-02637268⟩
  • Olivier REY, Lisa Fourtune, Ivan Paz-Vinas, Géraldine Loot, Charlotte Veyssiere, et al.. Elucidating the spatio-temporal dynamics of an emerging wildlife pathogen using approximate Bayesian computation. Molecular Ecology, 2015, 24 (21), pp.5348-5363. ⟨10.1111/mec.13401⟩. ⟨hal-01445165⟩
  • Olivier REY, Benoît Facon, Julien Foucaud, Anne Loiseau, Arnaud Estoup. Androgenesis is a maternal trait in the invasive ant Wasmannia auropunctata. Proceedings of the Royal Society B: Biological Sciences, 2013, 280 (1766), pp.20131181. ⟨10.1098/rspb.2013.1181⟩. ⟨hal-04080705⟩
  • Jan Oettler, Volker Schmid, Niko Zankl, Olivier REY, Andreas Dress, et al.. Fermat’s Principle of Least Time Predicts Refraction of Ant Trails at Substrate Borders. PLoS ONE, 2013, 8 (3), pp.e59739. ⟨10.1371/journal.pone.0059739⟩. ⟨hal-04080694⟩
  • Julien Foucaud, Olivier REY, Stéphanie Robert, Laurent Crespin, Jerome Orivel, et al.. Thermotolerance adaptation to human-modified habitats occurs in the native range of the invasive ant Wasmannia auropunctata before long-distance dispersal. Evolutionary Applications, 2013, 6 (4), pp.721--34. ⟨10.1111/eva.12058⟩. ⟨hal-02281551⟩
  • Olivier REY, Arnaud Estoup, Benoit Facon, Anne Loiseau, Alexandre Aebi, et al.. Distribution of endosymbiotic reproductive manipulators reflects invasion process and not reproductive system polymorphism in the little fire ant Wasmannia auropunctata. PLoS ONE, 2013, 8 (3), pp.e58467. ⟨10.1371/journal.pone.0058467⟩. ⟨hal-00850303⟩
  • Olivier REY, Gael G. Kergoat, Arnaud Estoup, Merav Wonshak, Anne Loiseau, et al.. Where do adaptive shifts occur during invasion? A multidisciplinary approach to unravelling cold adaptation in a tropical ant species invading the Mediterranean area. Ecology Letters, 2012, 15 (11), pp.1266-1275. ⟨10.1111/J.1461-0248.2012.01849.X⟩. ⟨hal-02645897⟩
  • Ruth Hufbauer, Benoit Facon, Virginie Ravigné, Julie Turgeon, Julien Foucaud, et al.. Anthropogenically induced adaptation to invade (AIAI) : Contemporary adaptation to human-altered habitats within the native range can promote invasions. Evolutionary Applications, 2012, 51 (2), pp.89-101. ⟨10.1111/J.1752-4571.2011.00211.X⟩. ⟨hal-01218264⟩
  • Olivier REY, Anne Loiseau, Benoit Facon, Julien Foucaud, Jérôme Orivel, et al.. Meiotic Recombination Dramatically Decreased in Thelytokous Queens of the Little Fire Ant and Their Sexually Produced Workers. Molecular Biology and Evolution, 2011, 28 (9), pp.2591-2601. ⟨10.1093/molbev/msr082⟩. ⟨hal-03303975⟩
  • Olivier Rey, Céline P Bonillo, Cyril Gallut, Corinne Cruaud, Agnès Dettaï, et al.. Naked dragonfishes Gymnodraco acuticeps and G. victori (Bathydraconidae, Notothenioidei) off Terre Adélie are a single species. Cybium : Revue Internationale d’Ichtyologie, 2011, 35 (2), pp.111-119. ⟨10.26028/cybium/2011-352-005⟩. ⟨hal-03787255⟩
  • Simon Blanchet, Olivier REY, Géraldine Loot. Evidence for host variation in parasite tolerance in a wild fish population. Evolutionary Ecology, 2010, 24 (5), pp.1129-1139. ⟨10.1007/s10682-010-9353-x⟩. ⟨hal-00594219⟩
  • J Foucaud, A Estoup, A. Loiseau, Olivier REY, J. Orivel. Thelytokous parthenogenesis, male clonality and genetic caste determination in the little fire ant: new evidence and insights from the lab. Heredity, 2010, 105 (2), pp.205-212. ⟨10.1038/hdy.2009.169⟩. ⟨hal-04080683⟩
  • Simon Blanchet, Olivier REY, Roselyne Etienne, Sovan Lek, Géraldine Loot. Species-specific responses to landscape fragmentation: implications for management strategies. Evolutionary Applications, 2010, 3 (3), pp.291-304. ⟨10.1111/j.1752-4571.2009.00110.x⟩. ⟨hal-01219020⟩
  • Simon Blanchet, Olivier REY, P. Berthier, S. Sovan Lek, Géraldine Loot. Evidence of parasite-mediated disruptive selection on genetic diversity in a wild fish population. Molecular Ecology, 2009, 18, pp.1112-1123. ⟨hal-00599070⟩
  • Olivier REY, J. Turgeon. Influence of historical events and contemporary estuarine circulation on the genetic structure of the banded killifish ( Fundulus diaphanus ) in the St. Lawrence River (Quebec, Canada). Canadian Journal of Zoology, 2007, 85 (8), pp.891-901. ⟨10.1139/Z07-075⟩. ⟨hal-04080643⟩

Communications dans un congrès4 documents

  • M. Blin, C. Robin, Stephen Mulero, Julien Portela, Olivier Rey, et al.. ELABU: Environmental Loop-mediated Isothermal Amplification (LAMP) for Bulinus truncatus field detection. ICOPA 2022, World Federation of Parasitologists, Aug 2022, Copenhague, Denmark. ⟨hal-03976641⟩
  • Olivier Rey. Linking epigenetics and biological conservation: Toward a conservation epigenetics perspective. ESEB 2022, European Society for Evolutionary Biology, Aug 2022, Prague, Czech Republic. ⟨hal-03990969⟩
  • Olivier Rey. Risque Sanitaire - Mettre en lumière l'invisible: le cas des trématodes. Séminaire web de l'Association Française de Limnologie "journée sur les espèces exotiques envahissantes ", Association Française de Limnologie, Jun 2022, ONLINE, France. ⟨hal-03990983⟩
  • Jeremie Vidal-Dupiol, Erwan Harscouet, Dor Shefy, Eve Toulza, Olivier Rey, et al.. Coral chimeras: when a loose of transcriptomic plasticity increase robustness. 14th International Coral Reef Symposium (14th ICRS), Jun 2016, Bremen (GERMANY), Germany. ⟨hal-03965148⟩

Poster de conférence1 document

  • Philippe Douchet, Bruno Senghor, Jérôme Boissier, Olivier Rey. Transmission of Schistosomes : Scaling up the competence concept to the ecosystem level. ICOPA 2022, Aug 2022, Copenhagen, Denmark. . ⟨hal-04007831⟩

Pré-publications, Documents de travail1 document

  • Julien Kincaid Smith, Alan Tracey, Ronaldo de Carvalho Augusto, Ingo Bulla, Nancy Holroyd, et al.. Whole genome sequencing and morphological analysis of the human-infecting schistosome emerging in Europe reveals a complex admixture between Schistosoma haematobium and Schistosoma bovis parasites. 2018. ⟨hal-03134801⟩

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